feat!: drop modules, general refactor and cleanup

runtime/queries/markdown/folds.scm

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+([
+  (fenced_code_block)
+  (indented_code_block)
+  (list_item
+    (list))
+  (section)
+] @fold
+  (#trim! @fold))
+
+(section
+  (list) @fold
+  (#trim! @fold))

runtime/queries/markdown/highlights.scm

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+;From MDeiml/tree-sitter-markdown & Helix
+(setext_heading
+  (paragraph) @markup.heading.1
+  (setext_h1_underline) @markup.heading.1)
+
+(setext_heading
+  (paragraph) @markup.heading.2
+  (setext_h2_underline) @markup.heading.2)
+
+(atx_heading
+  (atx_h1_marker)) @markup.heading.1
+
+(atx_heading
+  (atx_h2_marker)) @markup.heading.2
+
+(atx_heading
+  (atx_h3_marker)) @markup.heading.3
+
+(atx_heading
+  (atx_h4_marker)) @markup.heading.4
+
+(atx_heading
+  (atx_h5_marker)) @markup.heading.5
+
+(atx_heading
+  (atx_h6_marker)) @markup.heading.6
+
+(info_string) @label
+
+(pipe_table_header
+  (pipe_table_cell) @markup.heading)
+
+(pipe_table_header
+  "|" @punctuation.special)
+
+(pipe_table_row
+  "|" @punctuation.special)
+
+(pipe_table_delimiter_row
+  "|" @punctuation.special)
+
+(pipe_table_delimiter_cell) @punctuation.special
+
+; Code blocks (conceal backticks and language annotation)
+(indented_code_block) @markup.raw.block
+
+((fenced_code_block) @markup.raw.block
+  (#set! priority 90))
+
+(fenced_code_block
+  (fenced_code_block_delimiter) @markup.raw.block
+  (#set! conceal "")
+  (#set! conceal_lines ""))
+
+(fenced_code_block
+  (info_string
+    (language) @label
+    (#set! conceal "")
+    (#set! conceal_lines "")))
+
+(link_destination) @markup.link.url
+
+[
+  (link_title)
+  (link_label)
+] @markup.link.label
+
+((link_label)
+  .
+  ":" @punctuation.delimiter)
+
+[
+  (list_marker_plus)
+  (list_marker_minus)
+  (list_marker_star)
+  (list_marker_dot)
+  (list_marker_parenthesis)
+] @markup.list
+
+; NOTE: The following has been commented out due to issues with spaces in the
+; list marker nodes generated by the parser. If those spaces ever get captured
+; by a different node (e.g. block_continuation) we can safely re-add these
+; conceals.
+; ;; Conceal bullet points
+; ([(list_marker_plus) (list_marker_star)]
+;   @punctuation.special
+;   (#offset! @punctuation.special 0 0 0 -1)
+;   (#set! conceal "•"))
+; ([(list_marker_plus) (list_marker_star)]
+;   @punctuation.special
+;   (#any-of? @punctuation.special "+" "*")
+;   (#set! conceal "•"))
+; ((list_marker_minus)
+;   @punctuation.special
+;   (#offset! @punctuation.special 0 0 0 -1)
+;   (#set! conceal "—"))
+; ((list_marker_minus)
+;   @punctuation.special
+;   (#eq? @punctuation.special "-")
+;   (#set! conceal "—"))
+(thematic_break) @punctuation.special
+
+(task_list_marker_unchecked) @markup.list.unchecked
+
+(task_list_marker_checked) @markup.list.checked
+
+((block_quote) @markup.quote
+  (#set! priority 90))
+
+([
+  (plus_metadata)
+  (minus_metadata)
+] @keyword.directive
+  (#set! priority 90))
+
+[
+  (block_continuation)
+  (block_quote_marker)
+] @punctuation.special
+
+(backslash_escape) @string.escape
+
+(inline) @spell

runtime/queries/markdown/indents.scm

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+(list_item) @indent.auto

runtime/queries/markdown/injections.scm

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+(fenced_code_block
+  (info_string
+    (language) @_lang)
+  (code_fence_content) @injection.content
+  (#set-lang-from-info-string! @_lang))
+
+((html_block) @injection.content
+  (#set! injection.language "html")
+  (#set! injection.combined)
+  (#set! injection.include-children))
+
+((minus_metadata) @injection.content
+  (#set! injection.language "yaml")
+  (#offset! @injection.content 1 0 -1 0)
+  (#set! injection.include-children))
+
+((plus_metadata) @injection.content
+  (#set! injection.language "toml")
+  (#offset! @injection.content 1 0 -1 0)
+  (#set! injection.include-children))
+
+([
+  (inline)
+  (pipe_table_cell)
+] @injection.content
+  (#set! injection.language "markdown_inline"))